Publications [2004] [2003]

  • 2004
    • Sauve, Anne C. and Speed, Terence P. (2004) Normalization, Baseline Correction and Alignment of High-Throughput Mass Spectrometry Data Procedings Gensips 2004 [Preprint(PDF)]
    • Yu Chuan Tai and Terence P. Speed (2004) A multivariate empirical Bayes statistic for replicated microarray time course data. Submitted. Technical Report #667, Department of Statistics, University of California, Berkeley [Abstract] [Preprint(PDF)]
  • 2003
    • Irizarry, RA, Hobbs, B, Collin, F, Beazer-Barclay, YD, Antonellis, KJ, Scherf, U, Speed, TP (2002) Exploration, Normalization, and Summaries of High Density Oligonucleotide Array Probe Level Data. Biostatistics Vol. 4, Number 2: 249-264 [Abstract, PDF, Complementary Color Figures-PDF, Software]
    • Bolstad, B.M., Irizarry R. A., Astrand, M., and Speed, T.P. (2003), A Comparison of Normalization Methods for High Density Oligonucleotide Array Data Based on Bias and Variance. Bioinformatics 19(2):185-193 [Preprint(PDF) , Supplementary information]
    • Rafael. A. Irizarry, Benjamin M. Bolstad, Francois Collin, Leslie M. Cope, Bridget Hobbs and Terence P. Speed (2003), Summaries of Affymetrix GeneChip probe level data Nucleic Acids Research 31(4):e15
    • Y. Ge, S. Dudoit & T. P. Speed (2003), Resampling-based multiple testing for microarray data hypothesis (submitted to Test, Spain). Technical Report #633 of UCB Statistics. [Abstract, Pdf]
    • Barczak, A., Rodriguez, M. W., Hanspers, K., Koth, L. L., Tai, Y. C., Bolstad, B. M., Speed, T. P., and Erle, D. J. (2003), Spotted Long Oligonucleotide Arrays for Human Gene Expression Analysis Genome Research [link]