Statistics and Genomics Seminar
Fall 2005
Time:
Thursday 4--5pm
Location:334 Evans Hall
Organizer: Professor
Sandrine Dudoit
Program from previous semesters
For directions to Evans Hall, please consult the campus map.
Graduate Group in Computational and Genomic Biology
PB
HLTH
292, Section 013
Course control number: 76442.
2 units, register with the SF grade option.
Thursday, September 8th
Speaker: Dr. Marco Blanchette, Department of Molecular and Cell Biology, UC Berkeley.Thursday, September 15th
Title: Monitoring the level of alternatively spliced mRNA trough genome wide micro-arrays.
Speaker: Professor Torsten Hothorn, Institut fuer Medizininformatik, Biometrie und Epidemiologie Fiedrich-Alexander-Universitaet Erlangen-Nuernberg.
Title: A Computational Framework for Conditional Inference with an Application to Unbiased Recursive Partitioning.
Thursday, September 22nd
Speaker: Qing Zhou (Wong Lab), Department of Statistics, Stanford University.
Title: Detecting Cis-Regulatory Modules by Modeling Correlated Structures in Genomic Sequences.
Thursday, September 29th
Speaker: Professor Mark J. van der Laan, Division of Biostatistics, UC Berkeley.
Title: Multiple Testing Procedures for Control of Tail Probability of Proportion of False Positives.
Thursday, October 6th
Speaker: Dr. Katherine S. Pollard, Department of Biomolecular Engineering, UC Santa Cruz.
Title: New methods for detecting lineage-specific evolution of DNA.
Thursday, October 13th
Speaker: Cyrus Harmon, Department of Molecular and Cell Biology, UC Berkeley.
Title: Generation and Analysis of Spatial Patterns of Gene Expression in Imaginal Discs.
Thursday, October 20th
Speaker: Kasper D. Hansen, Division of Biostatistics, UC Berkeley.
Title: Locating transcription factor binding sites using ChIP on chip.
Thursday, October 27th
Speaker: Ben Brown, Graduate Group in Applied Science and Technology, UC Berkeley.
Title: Multiply Conserved Non-Coding Elements: In search of functional classifications.
Thursday, November 3rd
Speaker: Richard Bourgon, Department of Statistics, UC Berkeley.
Title: Localization of transcription factor binding sites via chromatin immunoprecipitation (ChIP) and high-density tiling arrays: an assay model, and its implications for analysis and interpretation.
Thursday, November 10th
Speaker: Professor David C. Kulp, Department of Computer Science, University of Massachusetts.
Title: Regulatory network dependencies from genetic variation and quantitative expression profiling.
Thursday, November 17th
Speaker: Maya Petersen, Division of Biostatistics, UC Berkeley.
Title: History-Adjusted Marginal Structural Models and Time-Dependent Causal Effect Modification.
Thursday, November 24th
Thanksgiving Holiday.
Thursday, December 1st
Speaker: Professor Ru-Fang Yeh, Division of Biostatistics, UCSF.
Title: Analysis issues of oligonucleotide tiling array data.
Thursday, December 8th
Speaker: Elizabeth Purdom, Department of Statistics, Stanford University.
Title: Analysis of Ecological Data: Use of Phylogenetic Trees with Diversity Measurements.