ALL dataset: Differentially expressed genes between BCR/ABL and NEG B-cell ALL

Probe	Symbol	Description	Chromosome	Chromosome Location	GenBank	LocusLink	Cytoband	UniGene	PubMed	Gene Ontology	Pathway	Test statistic	Adjusted p-value
1635_at	ABL1	v-abl Abelson murine leukemia viral oncogene homolog 1	9	130740384, 130618821	U07563	25	9q34.1	Hs.431048	160	regulation of progression through cell cycle S-phase-specific transcription in mitotic cell cycle nucleotide binding DNA binding protein-tyrosine kinase activity protein binding ATP binding nucleus mismatch repair regulation of transcription, DNA-dependent protein amino acid phosphorylation intracellular signaling cascade DNA damage response, signal transduction resulting in induction of apoptosis transferase activity	Cell cycle	8.44066	0
40202_at	KLF9	Kruppel-like factor 9	9	-70229068	D31716	687	9q13	Hs.150557	8	transcription factor activity nucleus transcription regulation of transcription from RNA polymerase II promoter zinc ion binding metal ion binding		6.33086	0
37027_at	AHNAK	AHNAK nucleoprotein (desmoyokin)	11	-62039950, -61957591	M80899	79026	11q12.2	Hs.502756	10	nucleus neurogenesis		5.70936	0.0014
39837_s_at	ZNF467	zinc finger protein 467	7	-148899099	AC004877	168544	7q36.1	Hs.112158	2			5.45029	0.0034
33774_at	CASP8	caspase 8, apoptosis-related cysteine peptidase	2	201923686, 201948284, 201950747, 201923693	X98172	841	2q33-q34	Hs.369736	172	signal transducer activity mitochondrion cytoskeleton proteolysis and peptidolysis cysteine-type peptidase activity apoptotic program caspase activity protein self binding regulation of apoptosis positive regulation of I-kappaB kinase/NF-kappaB cascade	Neurodegenerative Disorders MAPK signaling pathway Apoptosis Toll-like receptor signaling pathway Huntington's disease Dentatorubropallidoluysian atrophy (DRPLA)	5.28995	0.0042
2039_s_at	FYN	FYN oncogene related to SRC, FGR, YES	6	-112089177, -112089179	M14333	2534	6q21	Hs.390567	154	nucleotide binding protein-tyrosine kinase activity protein binding ATP binding protein amino acid phosphorylation protein kinase cascade learning feeding behavior transferase activity	Focal adhesion Adherens junction T cell receptor signaling pathway	5.21021	0.005
37014_at	MX1	myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)	21	41720023	M33882	4599	21q22.3	Hs.517307	35	nucleotide binding GTPase activity GTP binding cytoplasm induction of apoptosis immune response signal transduction response to virus		-5.22563	0.005
39329_at	ACTN1	actinin, alpha 1	14	-68410792	X15804	87	14q24.1-q24.2\|14q24\|14q22-q24	Hs.509765	33	actin binding structural constituent of cytoskeleton calcium ion binding actin cytoskeleton	Focal adhesion Adherens junction Tight junction Regulation of actin cytoskeleton	4.97401	0.0096
32542_at	FHL1	four and a half LIM domains 1	X	134955199	AF063002	2273	Xq26	Hs.435369	14	molecular function unknown nucleus muscle development zinc ion binding cellular component unknown organogenesis cell growth cell differentiation metal ion binding		4.95993	0.0102
40051_at	TRAM2	translocation associated membrane protein 2	6	-52470158	D31762	9697	6p21.1-p12	Hs.520182	5	protein targeting protein transport integral to membrane		4.59002	0.0268
38032_at	SV2A	synaptic vesicle glycoprotein 2A	1	-146688307	AB018279	9900	1q21.2	Hs.516153	5		ECM-receptor interaction	4.53859	0.0308
39319_at	LCP2	lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)	5	-169607666	U20158	3937	5q33.1-qter	Hs.304475	39	protein binding immune response transmembrane receptor protein tyrosine kinase signaling pathway intracellular signaling cascade	T cell receptor signaling pathway	4.5023	0.0346
33232_at	CRIP1	cysteine-rich protein 1 (intestinal)	14	105024593	AI017574	1396	14q32.33	Hs.70327	5	cytoplasm zinc ion binding cell proliferation antimicrobial humoral response (sensu Vertebrata) metal ion binding		4.46321	0.0368
36591_at	TUBA1	tubulin, alpha 1 (testis specific)	2	-219940505	X06956	7277	2q35	Hs.75318	14	nucleotide binding GTPase activity structural molecule activity protein binding GTP binding microtubule microtubule-based movement protein complex protein polymerization	Gap junction	4.3714	0.0444
38994_at	SOCS2	suppressor of cytokine signaling 2	12	92466065	AF037989	8835	12q	Hs.485572	18	regulation of cell growth SH3/SH2 adaptor activity growth hormone receptor binding prolactin receptor binding insulin-like growth factor receptor binding protein binding cytoplasm anti-apoptosis intracellular signaling cascade JAK-STAT cascade JAK pathway signal transduction adaptor activity negative regulation of signal transduction regulation of body size positive regulation of neuron differentiation	Jak-STAT signaling pathway Insulin signaling pathway	4.34612	0.0466
40076_at	TPD52L2	tumor protein D52-like 2	20	61967033	AF004430	7165	20q13.2-q13.3	Hs.473296	6	cell proliferation		-4.33183	0.048

16 Genes