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The following reports summarize the genes found DE – i.e. reports with heatmaps, gene enrichment. The sets of DE genes are broken up into relevant categories for these summaries (e.g. up-regulated in certain time periods)
- Some overall statistics & numbers…
- Global DE Analysis: results from the global DE analysis (i.e. fitting a spline funtion)
- Global Genotype DE Analysis: results from the global DE analysis (i.e. fitting a spline funtion) between Genotypes
- Global DE Analysis – Pre versus Post: Comparisons of the DE results of Pre and post flowering drought genes
- Before vs After at Water change point: results from comparing the time point after water change to the time point before, controlling for controlled watering
- First Time Point of Drought: These files give visualizations and enrichment analyses of the genes found DE when comparing the first collected time point of drought (week 3 in Preflowering and the first collection after week 9 watering in post-flowering drought)
- First Time Point of Recovery: These files give visualizations and enrichment analyses of the genes found DE when comparing the first collected time point after reinstating the water in Preflowering drought
- Constitutive Genotype differences (i.e. under control watering conditions)
Comparison of DE between Geno-specific/Ortholog and 623 Mapping