"Computational Biology, " Spring 2001

Syllabus: PDF | PS

Notes: PDF | PS

Labs: PDF | PS (not available currently)

Readings: PDF | PS (not available currently)

"Causal Inference, " Spring 2002

Syllabus: PDF | PS (not available currently)

Notes: PDF | PS

Labs: PDF | PS (not available currently)

Readings: PDF | PS (not available currently)

" Multivariate Statistical Methods in Genomics, " Fall 2007

Syllabus: PDF | PS (not available currently)

Notes: PDF | PS 

Labs: PDF | PS (not available currently)

Readings: PDF | PS (not available currently)

Multiple Testing Lecture: PPT

" Survival Analysis and Causality, " Spring 2004

Syllabus: PDF | PS (not available currently)

Notes: PDF | PS

Labs: PDF | PS (not available currently)

Readings: PDF | PS (not available currently)

Romain's slides: PDF | PS

"Causal Inference, " Fall 2004

Syllabus: PDF | PS

DSA lecture: PDF

Notes: PDF | PS

Labs: PDF | PS (not available currently)

Readings: PDF | PS (not available currently)

"Theoretical Statistics 210B, " Spring 2005

Syllabus: PDF | PS (not available)

Notes and Loss Based Estimation Lecture: PDF PDF | PS

Labs: PDF | PS (not available currently)

Readings: PDF | PS (not available currently)

" Survival Analysis and Causality, " Spring 2006

Syllabus and HW: PDF | PS (not available currently)

Notes: PDF | PS

Labs: PDF | PS (not available currently)

Readings: PDF | PS (not available currently)

Romain's slides: PDF | PS

"BASS Workshop 2007"

Overview:

Syllabus

Wednesday Afternoon Session:

Introduction

Prediction Methods

Cross-Validation and Super Learner Methodology

Super Learner HIV Example

Thursday Morning Session:

What to do when your data is censored

Targeted Maximum Likelihood Methodology: Applications to Biomarker Discovery

ETA Violations

Thursday Afternoon Session:

Multiple Testing Procedures

Multiple Testing Examples and Software

Multiple Testing Examples, Excerpt

Friday Morning Session:

Two Stage Multiple Testing

Variable Importance for Biomarker Discovery: Simulations