Week 1:
Lecture 1: How many genes? Mapping mouse
genes.
(pdf
ppt
ps)
Lecture 2: How many genes? Cont.
Part A (pdf
ppt)
Part B (pdf
ppt)
Week 2:
Lecture 3: How many genes? Completed. (pdf, ppt)
Lecture 4: Finding genes
associated with multiple sclerosis (MS) in Tasmania (pdf, ppt)
Week 3:
Lecture 5: Genes and MS in Tasmania,
cont. (pdf, ppt)
Lecture 6: Genes and MS in Tasmania,
cont. (pdf, ppt)
Week 4:
Lecture cancelled to permit
attendance at MSRI Workshop, see
Lecture 7: Genes and MS in Tasmania,
completed. (pdf, ppt)
Week 5:
Lecture 8: HMM in crosses and small
pedigrees (pdf, ppt)
Lecture 9: HMM in crosses and small
pedigrees, cont. [incomplete] (pdf,
ppt)
Week 6:
Lecture 10: QTL mapping in mice (pdf,
ppt)
Lecture 11: QTL mapping on mice, cont. (pdf, ppt)
Week 7:
Lecture 12: QTL mapping in mice, completed (pdf, ppt)
Lecture 13: Introduction to
molecular evolution (pdf, ppt)
Week 8:
Lecture 14: Molecular
evolution, cont. (pdf, ppt)
Lecture 15: Molecular
evolution, cont. Estimating rate matrices (pdf, ppt)
Week 9:
Lecture 16: Molecular
evolution, completed. (pdf, ppt)
Lecture 17: Introduction to
microarray technology (pdf, ppt) Extra (pdf)
Week 10: Spring break.
Week 11:
Lecture 18:
Statistical issues in the design of microaray experiments, by Jean Yang
(pdf, ppt)
Lecture 19:
Preprocessing of cDNA microarray data (pdf, ppt)
Week 12:
Lecture 20:
Identifying expression differences in cDNA microaray experiments (pdf, ppt)
Lecture 21:
Identifying expression differences in cDNA microarray experiments,
cont. (pdf, ppt)
Week 13:
Lecture 22: Multiple
testing in large-scale gene expression experiments (pdf, ppt)
Lecture 23:
Identifying differentially expressed sets
of genes in microarray experiments (pdf,
ppt)
Week 14:
Lecture 24:
Identifying cell cycle regulated genes (pdf, ppt)
Lecture 25: Serial
Analysis of Gene Expression (SAGE) data analysis (pdf, ppt)
Week 15:
Lecture 26: Biological
sequence analysis (pdf, ppt)
Lecture 27:
Introduction to array CGH data (pdf. ppt)
Week 16:
Lecture 28: Peptide
identification using tandem mass spec (pdf, ppt)
Lecture 29: